Transcriptome-wide microRNA target prediction including lncRNAs
miRcode 11 (June 2012) based on: UCSC GRCh37/hg19, GENCODE 11 transcripts, Multiz 46 species, TargetScan6 families
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Larsson lab
Download predictions
Tab-delimited files, for local computation or manual inspection (>100 MB uncompressed):
-> Highly conserved microRNA families
-> Medium-conserved microRNA families
(Note: these show weak expression overall and are only marginally enriched in 3'UTRs)
More details about the file format are found in the
FAQ
.
BED files:
-> Highly conserved microRNA families
-> Medium-conserved microRNA families
Inquiries can be addressed to
erik.larsson@gu.se
